8BEM Chain A
STE20-like serine/threonine-protein kinase (SLK)
Inactive — 3.0%DFG-outαC-inType1.5_Front · AV9
Resolution
2.6 Å
R-value
0.224
Predicted activity confidence3.0%
Structure info
Alternate conformationA
Missing atoms18
Missing residues4
Salt bridge (KinCore)Saltbr-none
Sequence info
PDB sequence
SMKQYEHVKRDLNPEDFWEIIGELGDGGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGSFIGTPYWMAPEVVMCETPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELIAEAKA
UniProt reference sequence
WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV
Aligned reference sequence
WEII----------------GELGDGA----------------FGKVYKAQN--KE------------------------------------TSVLAAAKVID--TKSEEE----------------------------LEDYMVEIDILASC--------------------------DHPNIVKLLDAFYYEN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLWILIEFCAG--------------GAVDAVMLE--LER------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLTESQIQVVCKQTLDALNYLHDN---------------------------------------------KIIHRDL-----KAGNILFTL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGDIKLADFGVSAKNTRTIQR--R---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSFIGTPYWMAPEVVMC--ETSKD-------------------------RPYD-YKADVWSLGITLIEMAEI-----------------EPPHHE--------------------------------------------------LNPMRVLLKIAKS--EPPTLAQPSRWS---------------------------------------------------------------------------------------------------SNFKDFLKKCLEKNVDARWT--------------TSQLLQHPFV
Shaded segments mark residues present in the UniProt reference but not resolved in this structure.
Projected alignment
WEII----------------GELGDG------------------GKVYKAQN--KE------------------------------------TSVLAAAKVID--TKSEEE----------------------------LEDYMVEIDILASC--------------------------DHPNIVKLLDAFYYEN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLWILIEFCAG--------------GAVDAVMLE--LER------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLTESQIQVVCKQTLDALNYLHDN---------------------------------------------KIIHRDL-----KAGNILFTL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGDIKLADFG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFIGTPYWMAPEVVMC--ET-----------------------------PYD-YKADVWSLGITLIEMAEI-----------------EPPHHE--------------------------------------------------LNPMRVLLKIAKS--EPPTLAQPSRWS---------------------------------------------------------------------------------------------------SNFKDFLKKCLEKNVDARWT--------------TSQLLQHPFV
Activation segment
DFG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFIGTPYWMAPE
Binding pocket
GELGDG__GKVYKAAAKVIDYMVEIDILASCDPNIVKLLDAWILIEFCAGGAVDAVMLEYLHDNKIIHRDLKAGNILFLADFG__
Ligand info
Orthosteric ligand
AV9
Allosteric ligand
None
Ligand typeType1.5_Front
Consensus conformation
DFG conformationout
αC-helix conformationin
Predicted activityinactive
KinaDB — structure detail · data from Browse_each_pdb_structure.csv · PDB 8BEM, Chain A