6EIM Chain A
Serine/threonine-protein kinase 10 (STK10)
Inactive — 3.5%DFG-outαC-inType2 · B6E
Resolution
1.43 Å
R-value
0.155
Predicted activity confidence3.5%
Structure info
Alternate conformationA
Missing atoms9
Missing residues6
Salt bridge (KinCore)Saltbr-in
Sequence info
PDB sequence
VRRDLDPNEVWEIVGELKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLAIAASDPPTLLTPSKWSVEFRDFLAIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKAEVMEE
UniProt reference sequence
WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV
Aligned reference sequence
WEIV----------------GELGDGA----------------FGKVYKAKN--KE------------------------------------TGALAAAKVIE--TKSEEE----------------------------LEDYIVEIEILATC--------------------------DHPYIVKLLGAYYHDG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLWIMIEFCPG--------------GAVDAIMLE--LDR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLTEPQIQVVCRQMLEALNFLHSK---------------------------------------------RIIHRDL-----KAGNVLMTL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGDIRLADFGVSAKNLKTLQK--R---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSFIGTPYWMAPEVVMC--ETMKD-------------------------TPYD-YKADIWSLGITLIEMAQI-----------------EPPHHE--------------------------------------------------LNPMRVLLKIAKS--DPPTLLTPSKWS---------------------------------------------------------------------------------------------------VEFRDFLKIALDKNPETRPS--------------AAQLLEHPFV
Shaded segments mark residues present in the UniProt reference but not resolved in this structure.
Projected alignment
WEIV----------------GEL----------------------KVYKAKN--KE------------------------------------TGALAAAKVIE--TKSEEE----------------------------LEDYIVEIEILATC--------------------------DHPYIVKLLGAYYHDG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLWIMIEFCPG--------------GAVDAIMLE--LDR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLTEPQIQVVCRQMLEALNFLHSK---------------------------------------------RIIHRDL-----KAGNVLMTL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGDIRLADFGVSAKNLKTLQK--R---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSFIGTPYWMAPEVVMC--ETMKD-------------------------TPYD-YKADIWSLGITLIEMAQI-----------------EPPHHE--------------------------------------------------LNPMRVLLAIAAS--DPPTLLTPSKWS---------------------------------------------------------------------------------------------------VEFRDFLAIALDKNPETRPS--------------AAQLLEHPFV
Activation segment
DFGVSAKNLKTLQK--R---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DSFIGTPYWMAPE
Binding pocket
GEL______KVYKAAAKVIDYIVEIEILATCDPYIVKLLGAWIMIEFCPGGAVDAIMLEFLHSKRIIHRDLKAGNVLMLADFGVS
Ligand info
Orthosteric ligand
B6E
Allosteric ligand
None
Ligand typeType2
Consensus conformation
DFG conformationout
αC-helix conformationin
Predicted activityinactive
KinaDB — structure detail · data from Browse_each_pdb_structure.csv · PDB 6EIM, Chain A