5XFJ Chain A
Fibroblast growth factor receptor 4 (FGFR4)
Inactive — 0.0%DFG-inαC-inType1 · 6LF
Resolution
3.25 Å
R-value
0.284
Predicted activity confidence0.0%
Structure info
Alternate conformation—
Missing atoms0
Missing residues1
Salt bridge (KinCore)Saltbr-out
Sequence info
PDB sequence
DLPLDPLWEFPRDRLVLGKPLGEGAFGQVVRAEAFGMDPARPDQASTVAVKMLKDDKDLADLVSEMEVMKLIGRHKNIINLLGVCTQEGPLYVIMECAAKGNLREFLRARRPPGPPLSFPVLVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDNVMKIADFGLLPVKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGSPYPGIPVEELFSLLREGHRMDRPPHCPPELYGLMRECWHAAPSQRPTFKQLVEALDKVLLAV
UniProt reference sequence
LVLGKPLGEGCFGQVVRAEAFGMDPARPDQASTVAVKMLKDNASDKDLADLVSEMEVMKLIGRHKNIINLLGVCTQEGPLYVIVECAAKGNLREFLRARRPPGPDLSPDGPRSSEGPLSFPVLVSCAYQVARGMQYLESRKCIHRDLAARNVLVTEDNVMKIADFGLARGVHHIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGSPYPGIPVEELFSLLREGHRMDRPPHCPPELYGLMRECWHAAPSQRPTFKQLVEALDK
Aligned reference sequence
LVLG----------------KPLGEGC----------------FGQVVRAEA--FGMDPARPD-----------------------------QASTVAVKMLK--DNASDKD---------------------------LADLVSEMEVMKLI--G-----------------------RHKNIINLLGVCTQEG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLYVIVECAAK--------------GNLREFLRA--RRPPGPDLSPDGPRSSEG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLSFPVLVSCAYQVARGMQYLESR---------------------------------------------KCIHRDL-----AARNVLVTE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNVMKIADFGLARGVHHIDYY--KKT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNGRLPVKWMAPEALFD--------------------------------RVYT-HQSDVWSFGILLWEIFTL--G--------------GSPYPG--------------------------------------------------IPVEELFSLLREG--HRMDRPPHCP-----------------------------------------------------------------------------------------------------PELYGLMRECWHAAPSQRPT--------------FKQLVEALDK
Shaded segments mark residues present in the UniProt reference but not resolved in this structure.
Projected alignment
LVLG----------------KPLGEGA----------------FGQVVRAEA--FGMDPARPD-----------------------------QASTVAVKMLK--D---DKD---------------------------LADLVSEMEVMKLI--G-----------------------RHKNIINLLGVCTQEG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLYVIMECAAK--------------GNLREFLRA--RRPPGP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLSFPVLVSCAYQVARGMQYLESR---------------------------------------------KCIHRDL-----AARNVLVTE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNVMKIADFGL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPVKWMAPEALFD--------------------------------RVYT-HQSDVWSFGILLWEIFTL--G--------------GSPYPG--------------------------------------------------IPVEELFSLLREG--HRMDRPPHCP-----------------------------------------------------------------------------------------------------PELYGLMRECWHAAPSQRPT--------------FKQLVEALDK
Activation segment
DFGL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPVKWMAPE
Binding pocket
KPLGEGAFGQVVRVAVKMLDLVSEMEVMKLIGKNIINLLGVYVIMECAAKGNLREFLRAYLESRKCIHRDLAARNVLVIADFGL_
Ligand info
Orthosteric ligand
6LF
Allosteric ligand
None
Ligand typeType1
Consensus conformation
DFG conformationin
αC-helix conformationin
Predicted activityinactive
KinaDB — structure detail · data from Browse_each_pdb_structure.csv · PDB 5XFJ, Chain A