5QTZ Chain A
TGF-beta receptor type-1 (TGFBR1)
Active — 98.5%DFG-inαC-inType1 · QMY
Resolution
1.83 Å
R-value
0.171
Predicted activity confidence98.5%
Structure info
Alternate conformationA
Missing atoms6
Missing residues0
Salt bridge (KinCore)Saltbr-in
Sequence info
PDB sequence
GHMTIARDIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE
UniProt reference sequence
IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ
Aligned reference sequence
IVLQ----------------ESIGKGR----------------FGEVWRGKW----------------------------------------RGEEVAVKIFS--SRE-------------------------------ERSWFREAEIYQTV--ML----------------------RHENILGFIAADNKDN--GTWT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLWLVSDYHEH--------------GSLFDYLNR--Y--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVTVEGMIKLALSTASGLAHLHME--IVGTQGKP-----------------------------------AIAHRDL-----KSKNILVKK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGTCCIADLGLAVRHDSATDT--IDIAP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHRVGTKRYMAPEVLDD--SINMKH------------------------FESF-KRADIYAMGLVFWEIARR--CSIGGIHEDY-----QLPYYD--LVPSD-------------------------------------------PSVEEMRKVVCEQ--KLRPNIPNRWQSCEAL-----------------------------------------------------------------------------------------------RVMAKIMRECWYANGAARLT--------------ALRIKKTLSQ
Shaded segments mark residues present in the UniProt reference but not resolved in this structure.
Projected alignment
IVLQ----------------ESIGKGR----------------FGEVWRGKW----------------------------------------RGEEVAVKIFS--SRE-------------------------------ERSWFREAEIYQTV--ML----------------------RHENILGFIAADNKDN--GTWT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLWLVSDYHEH--------------GSLFDYLNR--Y--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVTVEGMIKLALSTASGLAHLHME--IVGTQGKP-----------------------------------AIAHRDL-----KSKNILVKK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGTCCIADLGLAVRHDSATDT--IDIAP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHRVGTKRYMAPEVLDD--SINMKH------------------------FESF-KRADIYAMGLVFWEIARR--CSIGGIHEDY-----QLPYYD--LVPSD-------------------------------------------PSVEEMRKVVCEQ--KLRPNIPNRWQSCEAL-----------------------------------------------------------------------------------------------RVMAKIMRECWYANGAARLT--------------ALRIKKTLSQ
Activation segment
DLGLAVRHDSATDT--IDIAP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NHRVGTKRYMAPE
Binding pocket
ESIGKGRFGEVWRVAVKIFSWFREAEIYQTVMENILGFIAAWLVSDYHEHGSLFDYLNRTQGKPAIAHRDLKSKNILVIADLGLA
Ligand info
Orthosteric ligand
QMY
Allosteric ligand
None
Ligand typeType1
Consensus conformation
DFG conformationin
αC-helix conformationin
Predicted activityactive
KinaDB — structure detail · data from Browse_each_pdb_structure.csv · PDB 5QTZ, Chain A