5QIN Chain A
TGF-beta receptor type-2 (TGFBR2)
Active — 72.0%DFG-inαC-inType1 · J2V
Resolution
1.57 Å
R-value
0.188
Predicted activity confidence72.0%
Structure info
Alternate conformationA
Missing atoms6
Missing residues0
Salt bridge (KinCore)Saltbr-in
Sequence info
PDB sequence
ELLPIELDTLVGKGRFAEVYKAKLKQFETVAVKIFPYEEYASWKTEKDIFSDINLKHENILQFLTAEERKTELGKQYWLITAFHAKGNLQEYLTRHVISWEDLRKLGSSLARGIAHLHSDHTPCGRPKMPIVHRDLKSSNILVKNDLTCCLCDFGLSLRLDPTLSVDDLANQVGTARYMAPEVLASAMNLENVESFKQTDVYSMALVLWEMTSRCNAVGEVKDYEPPFGSKVREHPCVASMADNVLADAGRPEIPSFWLNHQGIQMVCETLTECWDHDPEARLTAQCVAERFSEL
UniProt reference sequence
IELDTLVGKGRFAEVYKAKLKQNTSEQFETVAVKIFPYEEYASWKTEKDIFSDINLKHENILQFLTAEERKTELGKQYWLITAFHAKGNLQEYLTRHVISWEDLRKLGSSLARGIAHLHSDHTPCGRPKMPIVHRDLKSSNILVKNDLTCCLCDFGLSLRLDPTLSVDDLANSGQVGTARYMAPEVLESRMNLENVESFKQTDVYSMALVLWEMTSRCNAVGEVKDYEPPFGSKVREHPCVESMKDNVLRDRGRPEIPSFWLNHQGIQMVCETLTECWDHDPEARLTAQCVAERFSE
Aligned reference sequence
IELD----------------TLVGKGR----------------FAEVYKAKL--KQNTSE--------------------------------QFETVAVKIFP--YEE-------------------------------YASWKTEKDIFSDI--NL----------------------KHENILQFLTAEERKT--ELGK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYWLITAFHAK--------------GNLQEYLTR--H--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VISWEDLRKLGSSLARGIAHLHSD--HTPCGRPKM----------------------------------PIVHRDL-----KSSNILVKN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLTCCLCDFGLSLRLDPTLSV--DDLAN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGQVGTARYMAPEVLES--RMNLEN------------------------VESF-KQTDVYSMALVLWEMTSR--CNAVGEVKDY-----EPPFGS--KVREH-------------------------------------------PCVESMKDNVLRD--RGRPEIPSFWLNHQGI-----------------------------------------------------------------------------------------------QMVCETLTECWDHDPEARLT--------------AQCVAERFSE
Shaded segments mark residues present in the UniProt reference but not resolved in this structure.
Projected alignment
IELD----------------TLVGKGR----------------FAEVYKAKL--K-------------------------------------QFETVAVKIFP--YEE-------------------------------YASWKTEKDIFSDI--NL----------------------KHENILQFLTAEERKT--ELGK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYWLITAFHAK--------------GNLQEYLTR--H--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VISWEDLRKLGSSLARGIAHLHSD--HTPCGRPKM----------------------------------PIVHRDL-----KSSNILVKN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLTCCLCDFGLSLRLDPTLSV--DDLAN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVGTARYMAPEVLAS--AMNLEN------------------------VESF-KQTDVYSMALVLWEMTSR--CNAVGEVKDY-----EPPFGS--KVREH-------------------------------------------PCVASMADNVLAD--AGRPEIPSFWLNHQGI-----------------------------------------------------------------------------------------------QMVCETLTECWDHDPEARLT--------------AQCVAERFSE
Activation segment
DFGLSLRLDPTLSV--DDLAN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QVGTARYMAPE
Binding pocket
TLVGKGRFAEVYKVAVKIFSWKTEKDIFSDINENILQFLTAWLITAFHAKGNLQEYLTRGRPKMPIVHRDLKSSNILVLCDFGLS
Ligand info
Orthosteric ligand
J2V
Allosteric ligand
None
Ligand typeType1
Consensus conformation
DFG conformationin
αC-helix conformationin
Predicted activityactive
KinaDB — structure detail · data from Browse_each_pdb_structure.csv · PDB 5QIN, Chain A